Publications

You can also find my articles on my Google Scholar profile.

The evolution and changing ecology of the Africanhominid oral microbiome

Published in PNAS, 2021

Recommended citation: Fellows Yates, J. A., Velsko, I. M., Aron, F., Posth, C., Hofman, C. A., Austin, R. M., Parker, C. E., Mann, A. E., Nägele, K., Arthur, K. W., Arthur, J. W., Bauer, C. C., Crevecoeur, I., Cupillard, C., Curtis, M. C., Dalén, L., Bonilla, M. D.-Z., Carlos Díez Fernández-Lomana, J., Drucker, D. G., Escrivá, E. E., Francken, M., Gibbon, V. E., González Morales, M. R., Mateu, A. G., Harvati, K., Henry, A. G., Humphrey, L., Menéndez, M., Mihailović, D., Peresani, M., Moroder, S. R., Roksandic, M., Rougier, H., Sázelová, S., Stock, J. T., Straus, L. G., Svoboda, J., Teßmann, B., Walker, M. J., Power, R. C., Lewis, C. M., Sankaranarayanan, K., Guschanski, K., Wrangham, R. W., Dewhirst, F. E., Salazar-García, D. C., Krause, J., Herbig, A. and Warinner, C. (2021) ‘The evolution and changing ecology of the African hominid oral microbiome’, Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences, 118(20). https://doi.org/10.1073/pnas.2021655118. https://doi.org/10.1073/pnas.2021655118

Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir

Published in Scientific Data, 2021

Recommended citation: Fellows Yates, J. A., Andrades Valtueña, A., Vågene, Å. J., Cribdon, B., Velsko, I. M., Borry, M., Bravo-Lopez, M. J., Fernandez-Guerra, A., Green, E. J., Ramachandran, S. L., Heintzman, P. D., Spyrou, M. A., Hübner, A., Gancz, A. S., Hider, J., Allshouse, A. F., Zaro, V., & Warinner, C. (2021). "Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir". Scientific Data, 8(1), 31. https://doi.org/10.1038/s41597-021-00816-y https://doi.org/10.1038/s41597-021-00816-y

Do I have something in my teeth? The trouble with genetic analyses of diet from archaeological dental calculus

Published in Quaternary International, 2020

Recommended citation: Mann, A. E., Fellows Yates, J. A., Fagernäs, Z., Austin, R. M., Nelson, E. A., & Hofman, C. A. (2020). Do I have something in my teeth? The trouble with genetic analyses of diet from archaeological dental calculus. Quaternary International. DOI:https://doi.org/10.1016/j.quaint.2020.11.019 https://doi.org/10.1016/j.quaint.2020.11.019

Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir

Published in bioRxiv, 2020

Recommended citation: Fellows Yates, J. A., Valtueña, A. A., Vågene, Å. J., Cribdon, B., Velsko, I. M., Borry, M., Bravo-López, M. J., Fernandez-Guerra, A., Green, E. J., Ramachandran, S. L., Heintzman, P. D., Spyrou, M. A., Hübner, A., Gancz, A. S., Hider, J., Allshouse, A. F., & Warinner, C. G. (2020). "Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir". In bioRxiv (p. 2020.09.02.279570). https://doi.org/10.1101/2020.09.02.279570 https://doi.org/10.1101/2020.09.02.279570

Micro Methods for Megafauna: Novel Approaches to Late Quaternary Extinctions and Their Contributions to Faunal Conservation in the Anthropocene

Published in Bioscience, 2019

Recommended citation: Swift, J.A; Bunce, M.; Dortch, J.; Douglass, K.; Faith, J.T.; Fellows Yates, J.A; Field, J.; Haberle, S.G; Jacob, E.; Johnson, C. N; Lindsey, E.; Lorenzen, E.D.; Louys, J.; Miller, G.; Mychajliw, A.M.; Slon, V.; Villavicencio, N.A.; Waters, M.R.; Welker, F.; Wood, R.; Petraglia, M.; Boivin, N.; Roberts, P. (2019) "Micro Methods for Megafauna: Novel Approaches to Late Quaternary Extinctions and Their Contributions to Faunal Conservation in the Anthropocene" Bioscience (OPEN ACCESS) https://doi.org/10.1093/biosci/biz105

Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage

Published in Microbiome, 2019

Recommended citation: Velsko, I.M.; Fellows Yates, J.A.; Aron, F.; Hagan, R.W.; Frantz, L.A. F; Loe, L.; Martinez, J.B.R.; Chaves, E.; Gosden, C.; Larson, G.; Warinner, C. (2019) "Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage" Microbiome 7(1) 102 (OPEN ACCESS) https://doi.org/10.1186/s40168-019-0717-3

Differential preservation of endogenous human and microbial DNA in dental calculus and dentin

Published in Scientific Reports, 2018

Recommended citation: Mann, A.E.; Sabin, S; Ziesemer, K; Vågene, Å.J.; Schroeder, H; Ozga, A.T.; Sankaranarayanan, K; Hofman, C.A.; Fellows Yates, J.A.; Salazar-García, D.C.; Frohlich, B; Aldenderfer, M; Hoogland, M; Read, C; Milner, G.R.; Stone, A.C.; Lewis Jr., C.M; Krause, J; Hofman, C; Bos, K.I.; Warinner, C (2018) "Differential preservation of endogenous human and microbial DNA in dental calculus and dentin" Sci. Rep. 8(1) 8922 (OPEN ACCESS) https://doi.org/10.1038/s41598-018-28091-9

Central European Woolly Mammoth Population Dynamics: Insights from Late Pleistocene Mitochondrial Genomes

Published in Scientific Reports, 2017

Recommended citation: Fellows Yates, J.A.; Drucker, D.G.; Reiter, E;, Heumos, S; Welker, F; Münzel, S.C.; Wojtal, P; Lázničková-Galetová, M; Conard, N.J; Herbig, A; Bocherens, H; Krause, K (2017). "Central European Woolly Mammoth Population Dynamics: Insights from Late Pleistocene Mitochondrial Genomes" Sci. Rep. 7(1):17714 (OPEN ACCESS) https://doi.org/10.1038/s41598-017-17723-1