bioinformatics

Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager
We present an advanced, and entirely redesigned and extended version of the EAGER pipeline for the analysis of ancient genomic data.
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir
AncientMetagenomeDir (archived at https://doi.org/10.5281/zenodo.3980833) is a collection of annotated metagenomic sample lists derived from published studies that provide basic, standardised metadata and accession numbers to allow rapid data retrieval from online repositories.
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir
AncientMetagenomeDir is a collection of indices of published genetic data deriving from ancient microbial samples that provides basic, standardised metadata and accession numbers to allow rapid data retrieval from online repositories.